| Protein: | FBpp0301888, FBp... |
| Organism: | Drosophila melanogaster |
| Length: | 1364 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0301888, FBp....
| Description | E-value | Query Range |
Subject Range |
|
|
920.0 | [0..25] | [880..25] |
|
Region A: Residues: [1-133] |
1 11 21 31 41 51
| | | | | |
1 MSTAMAMAAA ASSSAAAATA TTTAISNSTN TTASPATTNT INTTTKTITT SEVPLEPASN 60
61 MAPKALEIED SGRNEPEDLE HGAAKPLEQR KTTVVHTCPR PPGGYKYSME FLYGIGSGMA 120
121 GIPLNIPTPS SIT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [134-320] |
1 11 21 31 41 51
| | | | | |
1 PRTVRSTAPL LTTHMPLLTN MGVAPSRPSG IRYPGSAGGS NGTTVAASTT PSTTVTTSSG 60
61 SPGSGAEAIT SSVSSSGLPA AGLQAAQFIC QGYMPTGPQR RLWHAENAVW QFDRNYPYNQ 120
121 AYSPPYGIPM MPVGFEHPYG QRIIYPGYYN QTPPGINPAA VAGLTRTNRP VTQQPHILTQ 180
181 PAVGTTE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [321-406] |
1 11 21 31 41 51
| | | | | |
1 SSEEAPATLG NAPQVSSTWR YGRPGTHRGR HAVPTAAAPA LLHRDSKSFY NSIGSGMANG 60
61 PRFKAPFVAN VRNFQAGAVA TVAAGG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [407-526] |
1 11 21 31 41 51
| | | | | |
1 AATTAVVGTS APATGAASSS DQNVATKRNH QGAATQNNHR NRHNAKKGGK NSVGKELTSN 60
61 SSESLSNSSS KSQLNKRPSS SSSISPIKHP HRNYRNRMRY TATEPTEQKA ATTTVPISNY 120
121
|
| Detection Method: | |
| Confidence: | 37.0 |
| Match: | 2c6jA |
| Description: | Structure of P. knowlesi DBL domain capable of binding human duffy antigen |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [527-654] |
1 11 21 31 41 51
| | | | | |
1 QPPQQSTSTV RRTSKFQGSN AYQAHTAAGR QQSRFYQSRH MDGYVFQSGH YMVYAAGAPP 60
61 VGLRPGKSPV SEATGAPPGA AAATAAAATA VAATAAAAEG GGAAEGGGAA AAPVTASSAT 120
121 LEGEQPLD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [655-896] |
1 11 21 31 41 51
| | | | | |
1 SDFDQRQEFA DLGLDPANGG FSSDLEPNGI KQDTSELDTH SCLISHPNSE VDGDDNQSLA 60
61 SFAPSVESDD SDSELSDASV ESVARDILVS CLAVATGAEE PDFSGPNLVP YGDMHYLKEL 120
121 DKKNPPTNGY RSHRPYHQSH YAYHSQMSPR GLSCCGDMLN QHSEDLVFKL DQNQPDGIES 180
181 GKNIFLREIT EQPDNISVAS NLSCSPSASS SKSVLAPMAS KSNITMPEEN NDDDELPLVV 240
241 HN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [897-1364] |
1 11 21 31 41 51
| | | | | |
1 RYWREFFGYT PADRFLLRAK FVEMRRPPKV MGCKNKWDPL SLSVWKKFLE SQQTRHVYKI 60
61 KMRLWRAIYT VAMKNYPRYG LYLVGSSISY FGSKCSDMDI CMLACTNPNI DSRMEAVYHL 120
121 HVMKELLGRT NMFQDFNLIE ARVPILRFTD RCHKVEVDIN FNNSVGIRNT HLLYCYSQLD 180
181 WRVRPMALTV KQWAQYHNIN NAKNMTISSY SLMLMVIHFL QVGASPPVLP CLHNLYPEKF 240
241 GLLQPNDFGY VDMNEVMAPY QSDNSQTLGD LLLSFLHYYS VFDYGKYAIS IRVGGVLPIE 300
301 VCRAATAPKN DIHQWNELCI EEPFDQTNTA RSVYDTDTFE RIKTIFVASY RRLDSTRNLS 360
361 AIFEDYDGPT ILMQQPSVDS EIELYEGQHH RLLPNRGSSR SNSAIPSPRP SILMVDKATT 420
421 AIWDDINNKP DHPVLSHSNN YDATNECTGN GSLMGLKDNS VADKPPIA
|
| Detection Method: | |
| Confidence: | 63.69897 |
| Match: | 1q78A |
| Description: | Crystal structure of poly(A) polymerase in complex with 3'-dATP and magnesium chloride |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.996283185303782 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.943703677733022 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.72339234951343 | bayes_pls_golite062009 |
| protein binding | 0.0986191444342778 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0766350597400531 | bayes_pls_golite062009 |
