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View Structure Prediction Details

Protein: CG14516-PB
Organism: Drosophila melanogaster
Length: 999 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG14516-PB.

Description E-value Query
Range
Subject
Range
CG14516-PA, FBpp... - This gene is referred to in FlyBase by the symbol Dmel\CG14516 (CG14516, FBgn0039640). It is a prote...
874.0 [0..10] [999..1]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKFNFKPIM VVKEIPLHEN LNMESRPMNA ATPTTTTTFS KGGRRYSVSL TTAILLASFF  60
   61 ICTLLAVGFI VYNFATCAEL EPDSDEDVVC TSYHLRRLKA 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [101-999]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GHDDTPKYDR DVRLPHSIRP LKYNITIEPQ LSGNFTFAGS VQIRIRVLED CYNITMHAEE  60
   61 LNISRSDASV HRVQNNGEPE GDGLRIHKQY LVGAKQFFVI ELYDKLLKDV EYVVHLRFDG 120
  121 IIEDYLQGFY RSSYEVHNET RWVASTQFQA TDARRAFPCF DEPALKANFT LHIARPRNMT 180
  181 TISNMPIVSS NDHATMPSYV WDHFAESLPM STYLVAYAIS DFTHISSGNF AVWARADAIK 240
  241 SAEYALSVGP RILTFLQDFF NVTFPLPKID MIALPEFQAG AMENWGLITF RETAMLYDPG 300
  301 VATANNKQRV ASVVGHELAH QWFGNLVTPS WWSDIWLNEG FASYMEYLTA DAVAPEWKQL 360
  361 DQFVVNELQA VFQLDALSTS HKISHEVFNP QEISEIFDRI SYAKGSTIIR MMAHFLTNPI 420
  421 FRRGLSKYLQ EMAYNSATQD DLWHFLTVEA KSSGLLDDSR SVKEIMDTWT LQTGYPVVKV 480
  481 SRHPNSDVIR LEQVRFVYTN TTREDESLLW YIPITFTTDS ELNFANTRPT TWMPRTKLYE 540
  541 LENRELSLAK WFIFNVQQTG YYRVNYDLEN WMAITEHLMD VDNFEDIAPA NRAQLIDDVM 600
  601 NLARGSYLSY ETAMNLTRYL GHELGHVPWK AAISNFIFID SMFVNSGDYD LLKNYLLKQL 660
  661 KKVYDQVGFK DSQDESEDIL VKLKRADILS MACHLGHQEC IAEASRHFQN WMQTPNPDSN 720
  721 NPIVPNLRGV VYCSAIQYGT EYEWDFAFER FLKTNVPGEK DLLLNALGCS KEPWLLYRFL 780
  781 RRGISGQHIR KQDLFRVFAA VSTTVVGQNI AFDFLRNNWQ EIKTYMGSQM SSIHTLFKFA 840
  841 TKGFNSKFQL GEFENFVKDA HWDYDRPVQQ IVEHIETSVD WMNKNYKSIV RWLENEAQA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 128.0
Match: 1z1wA
Description: Crystal structures of the tricorn interacting facor F3 from Thermoplasma acidophilum, a zinc aminopeptidase in three different conformations
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle