YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CheB42a-PA
Organism: Drosophila melanogaster
Length: 198 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CheB42a-PA.

Description E-value Query
Range
Subject
Range
CheB53b-PA - The gene Chemosensory protein B 53b is referred to in FlyBase by the symbol Dmel\CheB53b (CG33524, F...
275.0 [0..1] [197..5]

Back

Predicted Domain #1
Region A:
Residues: [1-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKATFTILVL QVVICLAGAT EYQLTLDKDG LLAPCENQPG NPSGFEAMVD TSSLKVHNLG  60
   61 SKVRIEGEQK VVWKDVQPGD TLKVFGQVYR LDKGTWQKTM FTASSNNFCK NMFDKNQYWY 120
  121 NFWTKYISNS DEIKEKCLTT PGAVLKYKDY ELDLKTSLNV PNLDGRYKLV VQIEAFDKRN 180
  181 VRRPVPICIE FRGTAGQV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.27
Match: 1pu5A
Description: GM2-activator Protein crystal structure
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.150611973436827 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle