YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: NRBP2_MOUSE
Organism: Mus musculus
Length: 258 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NRBP2_MOUSE.

Description E-value Query
Range
Subject
Range
gi|109480893, gi... - gi|201860270|ref|NP_001128479.1| nuclear receptor binding protein 2 [Rattus norvegicus], gi|10948232...
304.0 [0..1] [258..234]
gi|21740358 - gi|21740358|emb|CAD39186.1| hypothetical protein [Homo sapiens]
299.0 [0..1] [258..37]
gi|61354640 - gi|61354640|gb|AAX41032.1| hypothetical protein LOC340371 [synthetic construct]
297.0 [0..1] [258..1]
gi|73974850 - gi|73974850|ref|XP_851919.1| PREDICTED: similar to nuclear receptor binding protein [Canis familiari...
294.0 [0..1] [252..243]
gi|114622315 - gi|114622315|ref|XP_001155260.1| PREDICTED: similar to MADML [Pan troglodytes]
294.0 [0..1] [258..257]
OXSR1_MOUSE - Serine/threonine-protein kinase OSR1 OS=Mus musculus GN=Oxsr1 PE=1 SV=1
255.0 [0..1] [248..215]

Back

Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCALEMAVLE IQANGDTRVT EEAIARARHS LSDPNMREFI LSCLARDPAR RPSAHNLLFH  60
   61 RVLFEVHSLK LLAAHCFIQH QYLMPENVVE EKTKAMDLHA VLAEMPQPHG PPMQWRYSEV 120
  121 SFLELDK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.0
Match: 2gcdA
Description: No description for 2gcdA was found.

Predicted Domain #2
Region A:
Residues: [128-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FLEDVRNGIY PLMNFAAARP LGLPRVLAPP PEEAQKAKTP TPEPFDSETR KVVQMQCNLE  60
   61 RSEDK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [193-258]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ARWHLTLLLV LEDRLHRQLT YDLLPTDSAQ DLAAELVHYG FLHEDDRTKL AAFLETTFLK  60
   61 YRGTQA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.0
Match: 2v3sA
Description: No description for 2v3sA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle