YRC Public Data Repository - Protein Structure Prediction

Protein:	PIGH_MOUSE
Organism:	Mus musculus
Length:	188 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PIGH_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|109479399, gi... - gi\|157823401\|ref\|NP_001102184.1\| phosphatidylinositol glycan anchor biosynthesis, class H [Rattus no...	274.0	[0..1]	[188..1]
ENSPTRT00000011843 - null gi\|60655901, gi\|... - gi\|60655901\|gb\|AAX32514.1\| phosphatidylinositol glycan class H [synthetic construct], gi\|60655899\|gb... PIGH - phosphatidylinositol glycan anchor biosynthesis, class H	271.0	[0..1]	[187..1]
gi\|60652811, gi\|... - gi\|60652811\|gb\|AAX29100.1\| phosphatidylinositol glycan class H [synthetic construct], gi\|60652809\|gb...	270.0	[0..1]	[187..1]
gi\|109084024 - gi\|109084024\|ref\|XP_001107223.1\| PREDICTED: phosphatidylinositol glycan, class H isoform 2 [Macaca m...	270.0	[0..1]	[187..1]
PIGH_BOVIN - Phosphatidylinositol N-acetylglucosaminyltransferase subunit H OS=Bos taurus GN=PIGH PE=2 SV=1	259.0	[0..1]	[187..1]
gi\|26326737 - gi\|26326737\|dbj\|BAC27112.1\| unnamed protein product [Mus musculus]	226.0	[0..1]	[158..1]
gi\|73964224 - gi\|73964224\|ref\|XP_854339.1\| PREDICTED: similar to Phosphatidylinositol N-acetylglucosaminyltransfer...	220.0	[0..1]	[184..1]
gi\|50748316 - gi\|50748316\|ref\|XP_421190.1\| PREDICTED: similar to GPI-H [Gallus gallus]	198.0	[0..3]	[187..2]
gi\|50540196, gi\|... - gi\|50540196\|ref\|NP_001002565.1\| phosphatidylinositol glycan anchor biosynthesis, class H [Danio reri...	177.0	[0..1]	[182..1]

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Predicted Domain #1

Region A:
Residues: [1-188]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDEKSFSDI CGGRLALRCR YYSPYCREFG LSSARLSLCS LTAVTCAVWL AAYGLFTLCE  60
   61 NSMVLSATIF ITILGLLGYL HFVKIDQETL LIIDSLGIQM TSSYASGKES TTFIEMDKVK 120
  121 DIIINEAIYM QKVIYYLCIL LKEPGKPHEI SRVVPVFQSA KPRLDCLIEV YRSCQEVLAH 180
  181 QKATATSL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits