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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187771142, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLAVFDRAA LMLICLFFLI RIRLFRELLH KSAHSPKELL AVTAIFSLFA LFSTWSGVPV  60
   61 EGSLVNVRII AVMSGGILFG PWVGIITGVI AGIHRYLIDI GGVTAIPCFI TSILAGCISG 120
  121 WINLKIPKAQ RWRVGILGGM LCETLTMILV IVWAPTTALG IDIVSKIGIP MILGSVCIGF 180
  181 IVLLVQSVEG EKEASAARQA KLALDIANKT LPLFRHVNSE SLRKVCEIIR DDIHADAVAI 240
  241 TNTDHVLAYV GVGEHNYQNG DDFISPTTRQ AMNYGKIIIK NNDEAHRTPE IHSMLVIPLW 300
  301 EKGVVTGTLK IYYCHAHQIT SSLQEMAVGL SQIISTQLEV SRAEQLREMA NKAELRALQS 360
  361 KINPHFLFNA LNAISSSIRL NPDTARQLIF NLSRYLRYNI ELKDDEQIDI KKELYQIKDY 420
  421 IAIEQARFGD KLTVIYDIDE EVNCCIPSLL IQPLVENAIV HGIQPCKGKG VVTISVAECG 480
  481 NRVRIAVRDT GHGIDPKVIE RVEANEMPGN KIGLLNVHHR VKLLYGEGLH IRRLEPGTEI 540
  541 AFYIPNQRTP VASQATLLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle