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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10047319
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFCEPTFQEK AMEIGWMHNR RQRQVLVFFV LLSLSGAGAE LGSYSVVEET ERGSFVANLG  60
   61 KDLGLGLTEM STRKARIISQ GNKQHLQLKA QTGDLLINEK LDREELCGPT EPCILHFQVL 120
  121 MENPLEIFQA ELRVIDINDH SPMFTEKEMI LKIPENSPLG TEFPLNHALD LDVGSNNVQN 180
  181 YKISPSSHFR VLIHEFRDGR KYPELVLDKE LDREEEPQLR LTLTALDGGS PPRSGTAQVR 240
  241 IEVVDINDNA PEFEQPIYKV QIPENSPLGS LVATVSARDL DGGANGKISY TLFQPSEDIS 300
  301 KTLEVNPMTG EVRLRKQVDF EMVTSYEVRI KATDGGGLSG KCTLLLQVVD VNDNPPQVTM 360
  361 SALTSPIPEN SPEIVVAVFS VSDPDSGNNG KTISSIQEDL PFLLKPSVKN FYTLVTERAL 420
  421 DREARAEYNI TLTVTDMGTP RLKTEHNITV QISDVNDNAP TFTQTSYTLF VRENNSPALH 480
  481 IGSVSATDRD SGINAQVTYS LLPPQDPHLP LASLVSINAD NGHLFALRSL DYEALREFEF 540
  541 RVSATDRGSP ALSSEALVRV LVLDANDNSP FVLYPLQNGS APCTELVPRA AEPGYLVTKV 600
  601 VAVDGDSGQN AWLSYQLLKA TEPGLFGVWA HNGEVRTARL LSERDAAKHR LVVLVKDNGE 660
  661 PPCSATATLH VLLVDGFSQP FLPLPEAAPG QTQANSLTVY LVVALASVSS LFLFSVLLFV 720
  721 VVRLCRRSRA ASVGRCSMPE GPFPGRLVDV SGTGTLSQSY QYEVCLTGGS ETSEFKFLKP 780
  781 IIPNFSP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle