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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2280488
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRLTRDKKFQ RYLARVTDIE ATDTNNPNVN YGIVVDCGSS GSRVFVYCWP RHNGNPHDLL  60
   61 DIRQMRDKNR KPVVMKIKPG ISEFATSPEK VSDYISPLLN FAAEHVPRAK HKETPLYILC 120
  121 TAGMRILPES QQKAILEDLL TDIPVHFDFL FSDSHAEVIS GKQEGVYAWI GINFVLGRFE 180
  181 HIEDDDEAVV EVNIPGSESS EAIVRKRTAG ILDMGGVSTQ IAYEVPKTEE VAKNLLAEFN 240
  241 LGCDVHQTEH VYRVYVATFL GFGGNAARQR YEDRIFANTI QKNRLLGKQT GLTPDMPYLD 300
  301 PCLPLDIKDE IQQNGQTIYL RGTGDFDLCR ETIQPFMNKT NETQTSLNGV YQPPIHFQNS 360
  361 EFYGFSEFYY CTEDVLRMGG DYNAAKFTKA AKDYCATKWS ILRERFDRGL YASHADLHRL 420
  421 KYQCFKSAWM FEVFHRGFSF PVNYKSLKTA LQVYDKEVQW TLGAILYRTR FLPLRDIQQE 480
  481 AFRASHTHWR GVSFVYNHYL FSGCFLVVLL AILLYLLRLR RIHRRTPRSS SAAALWMEEG 540
  541 LPAQNAPGTL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle