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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7959225
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTRLAPGGSP CLRRRGRPEE SPAAVVAPRG AGELQAAGAP LRFHPASPRR LHPASTPGPA  60
   61 WGWLLRRRRW AALLVLGLLV AGAADGCELV PRHLRGRRAT GSAATAASSP AAAAGDSPAL 120
  121 MTDPCMSLSP PCFTEEDRFS LEALQTIHKQ MDDDKDGGIE VEESDEFIRE DMKYKDATNK 180
  181 HSHLHREDKH ITIEDLWKRW KTSEVHNWTL EDTLQWLIEF VELPQYEKNF RDNNVKGTTL 240
  241 PRIAVHEPSF MISQLKISDR SHRQKLQLKA LDVVLFGPLT RPPHNWMKDF ILTVSIVIGV 300
  301 GGCWFAYTQN KTSKEHVAKM MKDLESLQTA EQSLMDLQER LEKAQEENRN VAVEKQNLER 360
  361 KMMDEINYAK EEACRLRELR EGAECELSRR QYAEQELEQV RMALKKAEKE FELRSSWSVP 420
  421 DALQKWLQLT HEVEVQYYNI KRQNAEMQLA IAKDEAEKIK KKRSTVFGTL HVAHSSSLDE 480
  481 VDHKILEAKK ALSELTTCLR ERLFRWQQIE KICGFQIAHN SGLPSLTSSL YSDHSWVVMP 540
  541 RVSIPPYPIA GGVDDLDEDT PPIVSQFPGT MAKPPGSLAR SSSLCRSRRS IVPSSPQPQR 600
  601 AQLAPHAPHP SHPRHPHHPQ HTPHSLPSPD PDILSVSSCP ALYRNEEEEE AIYFSAEKQW 660
  661 EVPDTASECD SLNSSIGRKQ SPPLSLEIYQ TLSPRKISRD EVSLEDSSRG DSPVTVDVSW 720
  721 GSPDCVGLTE TKSMIFSPAS KVYNGILEKS CSMNQLSSGI PVPKPRHTSC SSAGNDSKPV 780
  781 QEAPSVARIS SIPHDLCHNG EKSKKPSKIK SLFKKKSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle