YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47522392, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSRKHWTV CTISVLLVLF YKTTDIGRNE VHQKASLTWY LEPSATRLMA NGSEKLFGNV  60
   61 LNGLDLGVGW KINATLVSII RKDILRYLDA ERDVSVIKSN FKPGDTIRYV LDRRRTFSVS 120
  121 QTLHSLLPEV SPLKNKTFKT CAVVGNSGIL LKSGCGKEID NHSFVIRCNL APLEGFADDV 180
  181 GLRSDFTTMN PSVIQRVYGG LREETQQENL IQRLRQLNDS VLWIPAFMVK GGMKHVDTVN 240
  241 ELILKHKLKV RTAYPSLRLI HAVRGFWLTN KINIKRPTTG LLMYTMATRF CDEIYLYGFW 300
  301 PFPKDASGNP VQYHYFDGLK YRYFSNAGPH RMPLEFQTLQ RLHSKGALKL TTSKCTST

Type	Start	End	Confidence
Signal Peptide	1	24	0.78
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	358	0.99