YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13548685
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSSATKDA QALLHSLRSA HASTPTNLKI IDIYVLFAIF TAVIQVGYMA IVGSFPFNSF  60
   61 LSGVLSCVGT AVLAVCLRIQ VNKENKEFKD LPPERAYADF VLCNLVLHLV IMNFLG

Type	Start	End	Confidence
Cytoplasmic	1	29	0.97
Transmembrane Helix	30	52	0.89
Non-Cytoplasmic	53	58	0.81
Transmembrane Helix	59	79	0.93
Cytoplasmic	80	95	0.90
Transmembrane Helix	96	115	0.69
Non-Cytoplasmic	116	116	0.75