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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13516363
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKCVRNIYYQ SYTFSFVLAF VVLILFHPAI SMHFNTLLST ESLTISGNRT LVSPGHVFEL  60
   61 GFFKNTLNSR WYLGIWYKNL SDRTYVWVAN RDSSLSNAIG TLKFSGSNLV LRGRSNKFVW 120
  121 STNLTRGNER SPVVAELLAN GNFVIRYSYN NDASGFLWQS FDFPTDTLLP EMKLGYYLKT 180
  181 GLNRFLTSWR NFDDPSSGEF SYKLETRRLP EFYLLKNGSP GQRSGPWNGV QFSGIPEDQT 240
  241 LSYMVYNFTE NSEEVAYTFR MTDNSIYSRI QLSPEGLLER LTWTPTSGTW NLFWSAPVDI 300
  301 QCDVYMTCGP YAYCDVNTSP VCNCIQGFMP FDMQQWALRD GTGGCIRRTR LSCSSDGFTR 360
  361 MKNMKLPDTK MAIVDRSIDV KECEKRCLSD CNCTAFANAD IRNGGTGCVT WTGELEDIRN 420
  421 YIGNGQDLYV RLAAADLVKK RKANGKIISL IVGVSVLLLL IMFCLWKRKK NRAKASATSI 480
  481 DNQQRNQNVL MNGMTQSNKR QLSRENKTEE FELPLIELEA VVKATENFSN CNELGQGGFG 540
  541 IVYKGMLDGQ EVAVKRLSKT SLQGIDEFMN EVRLIARLQH INLVRILGCC IEADEKILIY 600
  601 EYLENSSLDY FLFGKKRSSN LNWKDRFAIT NGVARGLLYL HQDSRFRIIH RDLKPGNILL 660
  661 DKYMIPKISD FGMARIFARD EIQARTDNAV GTYGYMSPEY AMDGVISEKT DVFSFGVIVL 720
  721 EIVSGKRNRG FYQVNPENNL PSYVWTHWAE GRALEIVDPV ILDSLSSLPS TFKPKEVLKC 780
  781 IQIGLLCIQE RAEHRPTMSS VVWMLGSEAT EIPQPKPPVY CLIASYYANN PSSSRQFDDD 840
  841 ESWTVNKYTC SVIDAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle