YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48146321
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVLLLRHVG RHCLRAHFSP QLCIRNAVPL GTTAKEEMER FWNKNIGSNR PLSPHITIYS  60
   61 WSLPMAMSIC HRGTGIALSA GVSLFGMSAL LLPGNFESYL ELVKSLCLGP ALIHTAKFAL 120
  121 VFPLMYHTWN GIRHLMWDLG KGLKIPQLYQ SGVVVLVLTV LSSIGLAAI

Type	Start	End	Confidence
Cytoplasmic	1	69	0.94
Transmembrane Helix	70	92	0.88
Non-Cytoplasmic	93	109	0.76
Transmembrane Helix	110	129	0.87
Cytoplasmic	130	147	0.79
Transmembrane Helix	148	168	0.92
Non-Cytoplasmic	169	169	0.89