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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23478453
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INQNLQNNEC IRIRSYIYSK DDDEKNIKKN TYIQKFNLYE PSHDDHEKYI LPEKLVNTXL  60
   61 EIKTVNDLYS EYIYDMCNND NIINENDKFP INDSAFQKKK NSDHITSKTD ESNLVSTNNS 120
  121 VNNIKKKDDN ITQKFIEKYI SEIKEKKLKS YIKSKLNRLH FYNENVTGYI DENISYWAHN 180
  181 DKRDIYNNDY SDDDEEEEEN NCVEGDIKSD IDENINATNI IDTINNLNEK KSIRIGKGNK 240
  241 KYSYFDHAII DISIKENTDK NIILQLNNLK GVKEIWGYSS FLQGISLFYS NHISTYPHWV 300
  301 VYTHTNLTKS KTINNSKKKE KKKTEYYSEN YNKENCVSNG SNMMVSENMN NYTNGNAKKK 360
  361 KKKKQKKKSE INCEYKKGIT YTGASARIAH QSEVIFRNEI EKNKSFNNTY HSIYDSKKNI 420
  421 HPEWNGNDKY HDNNCNKNYN NSDNNRMKYS NANKCFPINT YTIENTNFYE PLLDSECDTR 480
  481 CENFKSPSGT IFSFFKRLFF KKKQIFDNKI PKNSVVRVEP KTFFANERTL LQWLNTSVLL 540
  541 STISITLLNF SNFYGFISGI IMAPVAIFFI IYSFYIYLKR ANALINKEPI DYTDKIGPGV 600
  601 LVVTLTFALS TVVILNVYSR FIGIPYKGGS PVNQK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle