YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83315798
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNRRIVLFF FFFFFLMQKK SSQYYRDHSK INYIDTDEYE NKNKRKRDSY MKPDVGADTC  60
   61 VIFSAEEGDP HNCWCPRGYI MCSEEDVTDL QTKLEKIKDK NTKSKLTPSW VKILCDNSKE 120
  121 YGFKNMSVVI DYELAVICKD MSNKENPDFE IIGASGYIPN EIVIKETKAD PTYVPRKCTV 180
  181 NNFYLCKKVE NDNVNCQYSH WSNWTPCIDK KQKRMKKIVR SNQNNTNFCL WNNKKVPRSI 240
  241 IEQTRSCE

Type	Start	End	Confidence
Signal Peptide	1	22	0.97
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	248	0.99