YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2137070
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PELKMAALLL RHVGRHCLRA HLNSQICLRN AVPLGTTAKE EMERFWNKNT SSKRPVSPHL  60
   61 TIYRWSLPMV MSICHRGTGV ALSGGVSLFG LSALLLPGNF ESYLMFIKSL CLGPALIHSA 120
  121 KFVLVFPLMY HSLNGIRHLI WDLGKGLSIS QVYQSGVAVL MLAVLSSVGL A

Type	Start	End	Confidence
Cytoplasmic	1	72	0.95
Transmembrane Helix	73	96	0.88
Non-Cytoplasmic	97	109	0.71
Transmembrane Helix	110	130	0.79
Cytoplasmic	131	148	0.71
Transmembrane Helix	149	170	0.80
Non-Cytoplasmic	171	171	0.83