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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SE1L1_MESAU
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVHVGLTLL LCAVLLSSAT ASSDDESNQD ESIDSKSSLP ADESVKDHST TGRVVAGQIF  60
   61 VDSEDPEVES PLQEEEESSK TEEEVSVGEE ISFVESPSLS SKSYEEAKRA RKPVLTAIEG 120
  121 TAHGEPCHFP FLFLDKEYDE CTSDGRQDGR LWCATTYDYK TDEKWGFCET EEDAAKRRQM 180
  181 QEAEMIYQAG MKILNGSNRK SQKREAYRYL QKAAGMNHTK ALERVSYALL FGDYLTQNIQ 240
  241 AAKEMFEKLT EEGSPKGQTA LGFLYVSGLG VNSSQAKALV YYTFGALGGN LIAHMVLGYR 300
  301 YWAGIGVLQS CESVLTHYRL VANHVASDIS LTGGSVVQRI RLPDEVENPG MNSGMLEEDL 360
  361 IQYYQFLAEK GDVQAQVGLG QLHLHGGRGV EQNHQRAFDY FNLAANAGNS HAMAFLGKMY 420
  421 SEGSDIVPQS NETALHYFKK AADMGNPVGQ SGLGMAYLYG RGIQVNYDLA LKYFQKAAEQ 480
  481 GWVDGQLQLG SMYYNGIGVK RDYKQALKYF NLASQGGHIL AFYNLAQMHA SGTGVMRSCH 540
  541 TAVELFKNVC ERGRWSERLM TAYNSYKDGD YNAAVVQYLL LAEQGYEVAQ SNAAFILDQR 600
  601 EATIVGENET YPRALLHWNR AASQGYTVAR IKLGDYHFYG FGTDVDYETA FIHYRLASEQ 660
  661 QHSAQAMFNL GYMHEKGLGI KQDIHLAKRF YDMAAEASPD AQVPVFLALC KLGVVYFLQY 720
  721 IREANIRDIF TQLDMDQLLG PEWDLYLMTI IALLLGTVIA YRQRQHQDVP VPRPPGPWPA 780
  781 PPQQEGPPEQ QPPQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle