YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|773300
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVVALSLR RRLPATTLGG ACLQASRGAQ TAAATAPRIK KFAIYRWDPD KAGDKPHMQT  60
   61 YEVDLNNRCG PMVLDALIKI KNEVDSTLTF RRSCREGICG SCAMNINGGN TLACTRRIDT 120
  121 NLNKVSKIYP LPHMYVIKDL VPDLSNFYAQ YKSIEPYLKK KDESQEGKQQ YLQSIEEREK 180
  181 LDGLYECILC ACCSTSCPSY WWNGDKYLGP AVLMQAYRWM IDSRDDFTEE RLAKLQDPFS 240
  241 LYRCHTIMNC TRTCPKGLNP GKAIAEIKKM MATYKEKKAS V

Type	Start	End	Confidence
Signal Peptide	1	33	0.93
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	281	0.99