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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41351845
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKSKTFKI GLTAGIVGLG VFGLTVGLSS LAKYRSESPR KIANDFAAKV STLAFSPYAF  60
   61 ETDSDYKIVK RWLVDSNNNI RNKEKVIDSF SFFTKNGDQL EKINFQDPEY TKAKITFEIL 120
  121 EIIPDDVNQN FKVKFQALQK LHNGDIAKSD IYEQTVAFAK QSNLLVAEFN FSLKKITEKL 180
  181 NQQIENLSTK ITNFADEKTS SQKDPSTLRA IDFQYDLNTA RNAEDLDIKL ANYFPVLKNL 240
  241 INRLNNAPEN KLPNNLGNIF EFSFAKDSST NQYVSIQNQI PSLFLKADLS QSAREILASP 300
  301 DEVQPVINIL RLMKKDNSSY FLNFEDFVNN LTLKNMQKED LNAKGQNLSA YEFLADIKSG 360
  361 FFPGDKRSSH TKAEISNLLN KKENIYDFGK YNGKFNDRLN SPNLEYSLDA ASASLDKKDK 420
  421 SIVLIPYRLE IKDKFFADDL YPDTKDNILV KEGILKLTGF KKGPKIDLPN INQQIFKTEY 480
  481 LPFFEKGKEE QAKLDYGNIL NPYNTQLAKV EVEALFKGNK NQEIYQALDG NYAYEFGAFK 540
  541 SVLNSWTGKI QHPEKADIQR FTRHLEQVKI GSNSVLNQPQ TAKEQVISSL KSNNFFKNGH 600
  601 QVASYFQDLL TKDKLTVLET LYDLAKKWGL ETNQAQFPKE AFQYTKDIFA EADKLKFLEW 660
  661 KKKDPYNQIK EIHQLSFNIL ARNDVIKSDG FYGVLLLPQS VKTELEGKNE AQIFEALKKY 720
  721 SLIENSAFKT TILDKNLLEG TDFKTFGDFL KAFFLKAAQF NNFAPWAKLD DNLQYSFEAI 780
  781 KKGETTKEGK REEVDKKVKE LDNKIKGILP QPPAAKPEAA KPVAAKPEAA KPVAAKPEAA 840
  841 KPVAAKPEAA KPVAAKPEAA KPVAAKPEAA KPVAAKPEAA KPVAAKPVAA KPEAAKPVAT 900
  901 NTGFSLTNKP KEDYFPMAFS YKLEYTDENK LSLKTPEINV FLELVHQSEY EEQKIIKELD 960
  961 KTVLNLQYQF QEVKVASDQY QKLSHPMMTE GSSNQGKKAE GAPNQGKKAE GTSNQQSPTS1020
 1021 ELTNYLPDLG KKIDEIIKKQ GKNWKTEVEL IEDNIAGDAK LLYFILRDDS KSGDPKKSSL1080
 1081 KVKITVKQSN NNQELKSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle