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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2136974, gi|1...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVASWLLSTL TFALVLLIKE TSTWTYHFSA ENMTYDEASA YCQQNYTHLV AIQNKEEIDY  60
   61 LNSILDYSPS YYWIGIRKVN NVWIWVGTHK PLTEGAKNWA PGEPNNKQNN EDCVEIYIKR 120
  121 PKDTGMWNDE RCSKKKLALC YTAACTEASC SGHGECIETI NNYSCKCYPG FSGLKCEQVV 180
  181 TCEAQVQPQH GSLNCTHPLG NFSYNSSCSV SCERGYLPSS TETTWCTSSG EWSAPPATCK 240
  241 VVECDTMGKP ANGDVKCSPS QGSAPWNTTC TFDCEEGFTL LGARSLQCTS SGSWDNEKPT 300
  301 CKAVSCDAIH HPQNGSVSCS NSSEGKFAFR SSCNFTCEEN FLLRGPAQVE CTAQGQWTQQ 360
  361 APVCEAVKCD PVHTLEDGFV KCTHPHTGEF TYKSSCTFNC REGFELHGSA QLECTSQGQW 420
  421 AQELPSCQVV QCPSLAVLGK TNVSCSGEPV FGTVCNFACP EGWTLNGSAA LMCGAEGQWS 480
  481 GMLPTCEEPI VSNVPLAVGL SVSGTSFLTL TSFLLWFLKY FRKKAKKFVP ASSRYVGLEA 540
  541 HGNCQVPSHL I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle