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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26346949
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKGPGPGGS AASSAPPAAT AQVLQAQPEK PQHYTYLKEF RTEQCPLFVQ HKCTQHRPYT  60
   61 CFHWHFVNQR RRRSIRRRDG TFNYSPDVYC TKYDEATGLC PEGDECPFLH RTTGDTERRY 120
  121 HLRYYKTGIC IHETDSKGNC TKNGLHCAFA HGPHDLRSPV YDIRELQAME ALQNGQTTVE 180
  181 GSIEGQSAGA ASHAMIEKIL SEEPRWQETA YVLGNYKTEP CKKPPRLCRQ GYACPYYHNS 240
  241 KDRRRSPRKH KYRSSPCPNV KHGDEWGDPG KCENGDACQY CHTRTEQQFH PEIYKSTKCN 300
  301 DMQQAGSCPR GPFCAFAHIE PPPLSDDVQP SSAVSSPTQP GPVLYMPSAA GDSVPLLCRN 360
  361 SGLGSPSHLC SSPPGPSRKA SNLEGLVFPG ESSLAPGSYK KAPGFEREDQ VGAEYLKNFK 420
  421 CQAKLKPHSL EPRSQEQPLL QPKQDVLGIL PVGSPLTSSI SSSITSSLAA TPPSPAGTNS 480
  481 TPGMNANALP FYPTSDTVES VIESALDDLD LNEFGVAALE KTFDNSAVPH PSSVTIGGSL 540
  541 LQSSAPVNIP GSLGSSASFH SASPSPPVSL SSHFLQQPQG HLSQSENTFL GTSASHGSLG 600
  601 LNGMNSSIWE HFASGSFSPG ASPAFLSGPG AAELARLRQE LDEANGTIKQ WEESWKQAKQ 660
  661 ACDAWKKEAE EAGERASAAG AECELAREQR DALELRVKKL QEELERLHTV PEAQTLPAAP 720
  721 DLEALSLSTL YSIQKQLRVH LEQVDKAVFH MQSVKCLKCQ EQTRAVLPCQ HAVLCELCAE 780
  781 GSECPVCQPS RAHALQS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle