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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27694714, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.90
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGIVHGILF CGLFGLCWAV TGSRIYPASE VTLLDSRSVQ GELGWIASPL EGGWEEVSIM  60
   61 DEKNTPIRTY QVCNVMESSQ NNWLRTDWIP RSGAQRVYVE IKFTLRDCNS LPGVMGTCKE 120
  121 TFNLYYYESN NDKERFIRET QYVKIDTIAA DESFTQVDIG DRIMKLNTEV RDVGPLSKKG 180
  181 FYLAFQDVGA CIALVSVRVF YKKCPLTVRN LAQFPDTITG SDTSSLVEVR GSCVDNSEEK 240
  241 DVPKMYCGAD GEWLVPIGNC LCNAGFEEHN GGCQACKVGY YKALSTDAAC SKCPPHSYAL 300
  301 REGSTSCTCD RGYFRADTDP ASMPCTRPPS APQNLISNVN ETSVNLEWSP PQNSGGRPDV 360
  361 SYNLVCKRCG SDLTRCRPCG SGVHYSPQQN GLKTTKVSIN DLQAHTNYTF EVWAINGVSK 420
  421 QNPEQDQAVS VTVTTNQAAP STVTQIQPKE ITRHSVSLTW PEPERANGVI LEYEVKYYEK 480
  481 DQNERSYRIV KTASRSADIK GLNPLTGYVF HVRARTAAGY GEFSGPFEFT TNTVPSPMIG 540
  541 EGTSPTVLLV SVAGSIVLVV ILIAAFVISR RRSKYSKAKQ EADEEKHLNQ GVKTYVDPFT 600
  601 YEDPNQAVRE FAKEIDASCI KIEKVIGVGE FGEVCSGRLK VPGKREIYVA IKTLKAGYTD 660
  661 KQRRDFLSEA SIMGQFDHPN IIHLEGVVTK CKPVMIITEY MENGSLDAFL RKNDGRFTVI 720
  721 QLVGMLRGIG SGMKYLSDMS YVHRDLAARN ILVNSNLVCK VSDFGMSRVL EDDPEAAYTT 780
  781 RGGKIPIRWT APEAIAYRKF TSASDVWSYG IVMWEVMSYG ERPYWDMSNQ DVIKAIEEGY 840
  841 RLPPPMDCPI ALHQLMLDCW QKDRSDRPKF GQIVSMLDKL IRNPNSLKRT GLENSSRTNT 900
  901 ALLDPSSPEW SQVASVLDWL QAIKMERYKD NFTAAGYTSL EAVVHVNQDD LTRIGISSPS 960
  961 HQNKILSSVQ GMRTQLQQMQ GRMVPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle