YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3261846
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLTGASMFL VWVGLLSWVS CRVDASEGFP SPLKRCKLQD ESCLLAQAQT FFQAFKNGIP  60
   61 ERQVAALEPI ALGTMFIESG GHSESIKFKL TMSDAKLYNL ANSMMVKSLK GFTKDLTRPL 120
  121 KLTLLLDNPE LEVRAKYDVD GKLLILPIVS KGDLTIRLND VHTKVWITAE PVKRSDGHTY 180
  181 LNITDYKTAT KIKGGHFDLS NLFNDNKELR DSTLKVLNLE WSTLALDVQP KINEACAKAF 240
  241 SAIVQSLWAN IPYDEFFEKE

Type	Start	End	Confidence
Signal Peptide	1	25	0.92
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	260	0.99