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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PP285_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCPLAFTFS LPSIFPFPSQ LLPFSRHKHP YLLRATPTSA TEDVASAVSG APSIFISQSR  60
   61 SPEWWIDLLR SKVRSNLLRE AVLTYVDMIV LGIKPDNYAF PALLKAVADL QDMELGKQIH 120
  121 AHVYKFGYGV DSVTVANTLV NLYRKCGDFG AVYKVFDRIS ERNQVSWNSL ISSLCSFEKW 180
  181 EMALEAFRCM LDENVEPSSF TLVSVVTACS NLPMPEGLMM GKQVHAYGLR KGELNSFIIN 240
  241 TLVAMYGKLG KLASSKVLLG SFGGRDLVTW NTVLSSLCQN EQLLEALEYL REMVLEGVEP 300
  301 DEFTISSVLP ACSHLEMLRT GKELHAYALK NGSLDENSFV GSALVDMYCN CKQVLSGRRV 360
  361 FDGMFDRKIG LWNAMIAGYS QNEHDKEALL LFIGMEESAG LLANSTTMAG VVPACVRSGA 420
  421 FSRKEAIHGF VVKRGLDRDR FVQNTLMDMY SRLGKIDIAM RIFGKMEDRD LVTWNTMITG 480
  481 YVFSEHHEDA LLLLHKMQNL ERKVSKGASR VSLKPNSITL MTILPSCAAL SALAKGKEIH 540
  541 AYAIKNNLAT DVAVGSALVD MYAKCGCLQM SRKVFDQIPQ KNVITWNVII MAYGMHGNGQ 600
  601 EAIDLLRMMM VQGVKPNEVT FISVFAACSH SGMVDEGLRI FYVMKPDYGV EPSSDHYACV 660
  661 VDLLGRAGRI KEAYQLMNMM PRDFNKAGAW SSLLGASRIH NNLEIGEIAA QNLIQLEPNV 720
  721 ASHYVLLANI YSSAGLWDKA TEVRRNMKEQ GVRKEPGCSW IEHGDEVHKF VAGDSSHPQS 780
  781 EKLSGYLETL WERMRKEGYV PDTSCVLHNV EEDEKEILLC GHSEKLAIAF GILNTSPGTI 840
  841 IRVAKNLRVC NDCHLATKFI SKIVDREIIL RDVRRFHRFK NGTCSCGDYW 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle