YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30681959, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.62
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEQAATAM ETSAVEKQPE TTTEAEAPSL TTKRMVVAID ESDSSFYALQ WVIDHFSNLL  60
   61 LTTAAAEAES GMLTVIHVQS PFNHFAAFPA GPGGATAVYA SSSMIESVKK AQQETSAALL 120
  121 SRALQMCRAK QIRTETLVLE GEAKEMICEA VEKMHVDLLV VGSRGLGKIK RYCIINNFFL 180
  181 YINLSAYYFV CFVRFGRAFL GSVSDYCAHH ANCPILIVKP PKEMTK

Type	Start	End	Confidence
Cytoplasmic	1	172	0.51
Transmembrane Helix	173	191	0.51
Non-Cytoplasmic	192	226	0.87