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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42571303
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRPGALTE WPWSPLGSFK YLLVAPLVMA SMHSYVTAVD EEKDLSRLMI VVLMLWRIVH  60
   61 SQIWISVSRQ RTAKGTNKIV DKPIEFEQVD RERTWDDQVI FNTLLMYLAN IKLPGASHLP 120
  121 PWRLDGAILM ALLHAGPVEF LYYWFHRALH HHFLYSRYHS HHHSSIVTEP ITSVVHPFAE 180
  181 HIAYTLLFAI PMVTASLCGI LSIVSIMGYI TYIDFMNNMG HCNFELFPKR LFHLFPPLKF 240
  241 LCYTPSFHSL HHTQFRTNYS LFMPIYDFIY GTTDNLTDSL YERSLEIEEE SPDVIHLTHL 300
  301 TTHNSIYQMR LGFPSLSSCP LWSRPPWYLT CFMWPFTLLC SFALTSAIPL RTFVFERNRL 360
  361 RDLTVHSHLL PKFSFHRHHE SINTIIEEAI LEADEKGVKV MSLGLMNNRE ELNGSGEMYV 420
  421 QKYPKLKIRL VDGSSMAATV VINNIPKEAT EIVFRGNLTK VASAVVFALC QKGVKVVVLR 480
  481 EEEHSKLIKS GVDKNLVLST SNSYYSPKVW LVGDGIENEE QMKAKEGTLF VPFSHFPPNK 540
  541 LRKDCFYQST PAMRVPKSAQ NIDSCENWLG RRVMSAWKIG GIVHALEGWE EHDCGNTCNV 600
  601 LRLHAIWEAA LRHDFQPLPP SPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle