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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y1699_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTISIFFVI ILMSSSHAED DVLCLKGFKS SLKDPSNQLN TWSFPNSSSS ICKLTGVSCW  60
   61 NAKENRILSL QLQSMQLSGQ IPESLKLCRS LQSLDLSFND FSGLIPSQIC SWLPYLVTLD 120
  121 LSGNKLSGSI PSQIVDCKFL NSLALNQNKL TGSIPSELTR LNRLQRLSLA DNDLSGSIPS 180
  181 ELSHYGEDGF RGNGGLCGKP LSNCGSFNGK NLTIIVTAGV IGAVGSLCVG FGMFWWFFIR 240
  241 DRRKMNNYGY GAGKCKDDSD WIGLLRSHKL VQVTLFQKPI VKIKLVDLIE ATNGFDSGNI 300
  301 VVSSRSGVSY KADLPDGSTL EVKRLSSCCE LSEKQFRSEI NKLGQIRHPN LVPLLGFCVV 360
  361 EDEILLVYKH MANGTLYSQL QQWDIDWPTR VRVAVGAARG LAWLHHGCQP LYMHQYISSN 420
  421 VILLDEDFDA RVIDYGLGKL VSSQDSKDSS FSNGKFGYVA PEYSSTMVAS LSGDVYGFGI 480
  481 VLLEIVTGQK PVLINNGEEG FKESLVEWVS KHLSNGRSKD AIDRRIFGKG YDDEIMQVLR 540
  541 IACSCVVSRP KERPLMIQVY ESLKNLGDQH GFFSEYSDEF PLIFNKQEHL K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle