YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28208262
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSMWLVRTA IALLLIVFLQ NAAAQKRPQQ SIVKSRGAVA TDDGRCSVIG MSVLRQGGNA  60
   61 IDASVAAALC LGVVSPASSG IGGGAFTVVK IAGGKAIAYD SRETAPLRAT EDMYGSNPDL 120
  121 KKKGALSAGV PGEVAGLFTA WKQHGKLPWK QLVTPAEKLA EGFRVSKYLY MQMNATRSDI 180
  181 LADKGLSELF VSNGELKKPG TIIHNRKLAF TLKQIGEYGP KAFYNGTVGV NLARDIIKAG 240
  241 GIITLKDLQS YRVKVSKPLS ANILGYELLG MPPPSSGGAA MMLVLNILSQ YGIPSGVSGS 300
  301 LGVHRLIEAL KHAFAVRMNL GDPDFVNVTK VVSDMLSPEF AKDLKKKIND DKTFDPKYYG 360
  361 GIWNQINDHG TSHLSIIDRE RNAVSMTSTI NGYFGAVMLS PSTGIVLNNE MDDFSIPTKS 420
  421 TGNLNVPPPA PANFIRPGKR PLSSMSPTIV LKDGKVKAAV GASGGANIIS GTIEVFLNHF 480
  481 FLNMDPLSSV LAPRIYHQLI PNRVSFENWT TVFSDHFEVP KETRVVLEKK GHVLTPIAGG 540
  541 TIAQFIVQES DRNAGGMSKL VAVSDPRKGG FPSGY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle