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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39970947, gi|...
Protein type: Transmembrane
Type Confidence: 0.53
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADGEPDISD LSPEQQEALQ QYTMITDQSV QDAIPLLQRS QWNAQIAIAK FFDGEQPDPV  60
   61 AEALAAQEQN QQAGGPGLGG TARFENLQDS LDGIEMDIVR SRRHRTEAAP RVVPQPARIY 120
  121 RVPFLWSIIT LPFSLTWRIA TTLFRPIVYL LGLLPCNMRP RAIGAAGYGR RQLMPRDAAA 180
  181 RFKREFEENY GSGELPWYDG GSAQAYDAAK RELKFLLIVL LSPEHDDTDS FVRDVLLSPE 240
  241 VVSFIKDEKN NIILWGGNIV DSEAYQVSFE YRCTRFPFAC LVCLTPKEGS TRMGTIKRIQ 300
  301 GAVTPERFLG DIRSAIHKHN PDLDGVRAER VAQEAARNLR ADQDSAYERS LAKDREKARL 360
  361 RREAEAAAAA AEKRALEEAE AAARLEEKRR QWKAWRATTL AEEPPAAEKD VVRLALMMPE 420
  421 YTGAGRIVRR FARETTMEEL YAFVECYDAT RGDAEKPPLQ PDDYEHEYKF RIVSPMPREV 480
  481 YEPSTAATVG DKIGRSGNLI VETIVSDSDD EE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle