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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|145014645, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPTSPRNP QRMGFMPING GRGSEEEADI PLSTIRTASS TGARKPNQAI ETNMMASEKT  60
   61 PGIGPGRRRL KNGLADQGRR GTGGTDDVAL NAMGRLYYKI IGFSVVTRYL VYIVPVGLLL 120
  121 LIPIIVLIAT GNIDDDKIRL GGNEGPALYR LFVWIMASWL GLWAGKIVAH LLPPIFMFFC 180
  181 GVVSSGTRKY ATVIRALEIP LSLFFWALVS WLLFRFLFPD GPPLDSIQWI TVMKKILGAL 240
  241 FVSSAVFLGE KTIVQLISIT YHQRSFANRI KDSKREVYLL GLLYDASRTL FPMYCPEFIE 300
  301 EDSIINDSLD VMLKKVKGSG SATPMRLIGN VGANVGRLGD KITSVFGNVA SEITGKQVFN 360
  361 PNSSHSICVE ALEKVKTSEA LARRIWMSFV VEGSDSLSQE DIEEVLGPEH KEDAEECFAA 420
  421 IDADQNGDIS LDEMVRKVVE IGIERKAIAN SMKDISQALA VFDEILLFIV ALIVVFIFLA 480
  481 FFQSTFITTL ATAGTALLSL SFVFAVTTQE FLGSCIFLFV KHPFDVGDRV DITGPEKEQL 540
  541 IVERISLLYT VFTRIDKMQV VQVPNIVLNN LWIENVTRSK AMKETIDVNV SYDTTFEDIE 600
  601 LLRMEMEKFV RHPDNARDFM PDFSISVGSV GDLDKMTLKV TIKHKSNWHN DAVRATRRSK 660
  661 FMCALALALK RVPIHGPGGG GEPLGGPTNP TYSVAVSDGF ASDARDKANK AKDSARMVPT 720
  721 KTLSRSGSSA SQKSRREKES ANELNSPVDV ARQAAAGYGN RDGDMLDDMS PVDRQRTNDL 780
  781 TNLRKDMITK NQSQRGRRQA GQTLPPQSLG ETGPRLTLTR EESNPGNPSR SPRFDVESQT 840
  841 GGLSPGMGSP GFGTPAAGGG NSTFAGNPYY SSTATTLGGP QAQQGYSVFP RPAGSSSPPS 900
  901 TSTNFAGLQA PTHPLQSAPT TGSRARGQSV SSTRDLTAQR PPQQQGGPGG RL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle