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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39944068, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFKRQLKDC LVTSVLLANL FGTAVAKDES ILHTEVAHLN NDTLLWGPYK PNLYFGVRSR  60
   61 TPKSLNMGLL WAKLDNYNEV QHHIRYTCEQ NEGMAGYGWD EYDTRRGGVQ TIHDAQNQID 120
  121 ISTSFVKIPG GANGGSWAAR IKGELRPDAA KDAKTGVWLY ITQEGLGSLE TVGSGDDNGF 180
  181 PDDFSLKGNS QTLGDYKISV TKGTGEHPDG HEELSKERDL KKTSVQSISI PEEALWQAKP 240
  241 VIFRQLKEHI ESIQSRFGEE DTPQPWDVYA LPHKPGGGNA HIVQKIFEGS FEFDVIFNSA 300
  301 SAGKELGSDD VTREIRSTTE AFGERFSDVF NLKAPFTADK YKKFGRSMFS NLIGGIGYFY 360
  361 GDSVVDRSYA PEYEEENEGF WEEAAQARAR KQEGMEEPSE LFTSIPSRPF FPRGFLWDEG 420
  421 FHLIPIADWD MDLTLEIVKS WFNLMDDDGW IAREQILGAE ARSKVPAEFQ VQYPHYANPP 480
  481 TLFFIIDTFV ERLRKLNGTM PAHKEQLSQG ASVSNSHIEN PIVGTEFLRN LYPLLRKQYD 540
  541 WFRSTQKGDI KSYDREAFSK REAYRWRGRT VQHVLTSGLD DYPRPQPPHP GELHVDLMSW 600
  601 MGLMTKSLLN IADALGMQEE VAEFQKNLEA IERNLDDLHW SEKEGCYCDA TIDAFEEHQL 660
  661 VCHKGYISLF PFITGLLKHD SSKLGRTLDL IGDEEELFSP HGIRSLSLKN EFYGTAENYW 720
  721 RSPVWININY LTLVQLKNVA TQDGPYKQKA KDLYTKLRIN LIDTVYKSWE ETGFAWEQYN 780
  781 PETGKGQRTQ HFTGWTSLVV KIMTMDDLGG GAAPSKGHEK DEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle