YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39944860, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGIDWMSLV LPFSYILVLG GTFMTFSSVY RKRKATQSAN LAPWFPPHLQ RNIYLSLLHL  60
   61 DPEDGSEKAP KVPESVLRTA LLRRAVEDIH RIIQIRTAKA ACSSLLARGS VGDDLWQRFS 120
  121 RAEKEMEEEL RDVVMEANAL APNWGQTIFQ SANEIAANTM LRKRLDDITN QTEAEKEWWA 180
  181 KRQGAAGIEQ PAASSPTTTT SESLPATSKE TPGSSEDGIL VEDDVPESST PAPAAPAPVQ 240
  241 TPSAPPSEPG TPSSKKKKKG KK

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.74
Transmembrane Helix	8	30	0.85
Cytoplasmic	31	262	0.78