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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39945618, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARNRVLSFV SQFSAAGRDH NNRTPTPTSN SPPRSNGTIP FPPLQTSLGH SHETTNSVFS  60
   61 PTPSSPTRPD FTASPVAASL NGDSPPDSSP RTGRQRANSR PLSMVQTYTP PVMDVNEDTI 120
  121 PELQPIFTFL NNHSNKLYQE GYFLKLDDQN SQGRPNPDRT WTECFAQLVG TVLSLWDAAE 180
  181 LDAAGEHGEV LPKFINLTDA SIKMIESLPT RSNDEQPLQN ILSISTAGRN RYLLHFNSHH 240
  241 SLIQWTAGIR LAMFEHTTLQ EAYTGALIAG KGKTLNNIGV VMERSRLKTE DWVRVRFGAG 300
  301 VPWRRCWCVI TPPDEKEYQK QQKELKKRSP YDRSPVPLLK GDIKFYDTRK EGKKQKKAKP 360
  361 IASISDANAA YAIYPQAKSL IDASTLLKIE GNITIHSDPP SSTEGFVFIM PESHPGVSGF 420
  421 EMLLRYLFPT WDTFGLYGRP GRLIASVLDQ RSLMFGMPKH KKYGYLEILD VTSLILSDGS 480
  481 GSWSEKEWRR RLKELTAARM TAMDEDMKAN GHSRSASRRS ARLSIGPGSS VSHGRPRVNF 540
  541 ADESDTRRTS RSMTVSERPS HRNDSAPPAA ERQRVPSPPT KNGHSRNVSD TRLETQFEQM 600
  601 PYRHTPGFDS PVSVASPSPM NGGPQARGFV NDLASTPERL SSEDELPPNP PPRDFGNMER 660
  661 MQTPEPVHPP PAFSHAPSSR PAGKPYHSPE LRRANSRLSS TTLAQLANAG GVKPESYKDE 720
  721 FGRTSSESSS GSRPVQGDPR SQAVHAHVNS LGITANSNRS REAINQSSDR STPTPPGQPP 780
  781 GPATPRDPGS QLHKSPLNQA MVPPSPQEME SQRSHPRYES RTGSIPSSGP VHRKPLPQQA 840
  841 HHALAQITRQ DTQRSETSNY DDEDSTTGSH DYASTTSAES VKSVERPRMG VLKTVGAEQQ 900
  901 AQLTNAEKSY DIPQIDFGPT INYASTPTPR SKTPTPLSNN ESHGSRARSP NISLSPSPGQ 960
  961 THHRQGSSDT LRKMAWQPGA IAGSSDRPGA LTPEQYVQQK AAAASATPLY AHSRSPSSNT1020
 1021 LTAMRNNTPT PPLHKRSSSY DMLRLREGHS RSNSADLLRP GSQGALTTLG YGSGDVPARM1080
 1081 SPREQEHIAR GSGGHPVSMA TNNGSMQPGG LVGVIQARER EKAEIKQGVS SALAYEAKNR1140
 1141 QEREMRQQQQ QQLQYTSQAA YGAHSQPGFA GGVPSMYSGH VVQPASHWGG PAAIPRGEMG1200
 1201 YVDVYGQPEL QPSPQFHSHM QGSPASQYRP ASFSRPWPRQ GQAQGVSPGG YATPPAGPHP1260
 1261 SRGRSEAMGN MGREAQSHRV WRRQATFIER ATRFYPIART ESGTSVDTTA VDGATSLFGF1320
 1321 DAASLQPNHR TGRIDRFPAS VVGMRRLPRY PSSLCSSLPI YTPRRANPAA AATHLPRYPL1380
 1381 GPQSATCLWF SACDERRSSS NASPPETRRR RGQTLPFRFE TGIALFAKRT PRPFPPPFLS1440
 1441 PPSGSFSDPL STHHRSRDRR SAYVNGELIR GRTNGDDAVL ASDSFICAND GVGAWSARPR1500
 1501 GHSGLWARLI LHFWAQAVDG VGSSESSSTG GDRAGGRPDP VADLQRAFEQ TQEATSPPND1560
 1561 WQGTTTVAGA QIFYREPNGG SNGAEDGSPS PVPVLYVTNL GDSQIMVIRP STREIVFKTT1620
 1621 EQWHWFDCPR QLGTNSPDTP AKNAVLDVVD IQEGDVVIAM SDGVIDNLWP HEIVECVCDS1680
 1681 VRKWESGTVP ADYSARDDDG ADLQEFDADG DRTGGANGGM QLVADELMEA ARIIAVDPFA1740
 1741 ESPYMEHAIE EGLPSEGGKL DDISVVAALC RRTIK

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