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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38104511, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRPGILFVL GLLCDAVIAS IGPDSGLEVQ HVLKDPHGYA LEAPPHRPLH GRFLHITDFH  60
   61 PDTFYKLHTS TDEDIACHRG EGNAGYYGAE MSDCDTPVSL VNATFDWLDK YWKDKIDFIV 120
  121 WTGDSARHDS DEEIPRNAKQ VLGTNRMIAN KFTDLLYNES TRALSIPVVP TFGNNDILPH 180
  181 NIMLPGPNRW LQDYSNIWTN FIPEEQRHSF ELGGYFYVEV IPNKLAVFSL NTLYFFDRNA 240
  241 AVDDCINPSE PGYKQLEWLR VQLHFMRQRG MKAIMIGHVP PARTDSKMLW DESCWQKYTL 300
  301 WMQQYRDVVT AGIYGHMNID HFMLQDSQEV DLHLLDNGIL DGGLRENLDD ELTVMGATDY 360
  361 LKEMRDRWSK LPRSAGQIAG EPSTLALKKK KKHENLGGPW GERYSATMVG GSIVPNFYPS 420
  421 FRIYEYNTSG LETAAIWTGP VVDRTASAAE IIDITDRESM KHILAEIEKK KKKKGRKDKP 480
  481 KPKDPNLIKP EPPAKTSPPG PAYSPQPFTL LRYEQWFANL TRINNEQVDD ESEVEAAKWR 540
  541 SGKPGNKPSK KPPGEFMFEV EYNTSTDKVL KITDLTVPSF LKLAYRMGKR EQRGKSLDIE 600
  601 ADALSLEDGG DFDSDWYVVL DDEGTEYGNE TVVEQTMKKG KKNKKDKNKK KHKKHNKVWL 660
  661 RFLKHAFIST VDKRELEKLD R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle