YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39940286, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLSNLMPP LDNGLLPAYL MLVSVLAIGN ALQNFTTLHY SRRIYNGLFV SNPALKRKER  60
   61 TDENPRHNPE DSINKLVPAS STGKDVEKAN DQLTPLAARL FAVWTLITGV VRLYTAYDVS 120
  121 NPALYQLSVL THFLAGGHFL SELLVFKTCR PSVPVLFPIF AGSTGFIWMT LQYTHYVGPF 180
  181 TLPLFR

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.92
Transmembrane Helix	15	36	0.88
Cytoplasmic	37	95	0.95
Transmembrane Helix	96	116	0.87
Non-Cytoplasmic	117	122	0.85
Transmembrane Helix	123	146	0.82
Cytoplasmic	147	152	0.87
Transmembrane Helix	153	175	0.87
Non-Cytoplasmic	176	186	0.92