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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38106918, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSFRMPMPK GVPAYKSKFG PNYHLQPNVH GTTLKTIAGI GMRAAGFGGV ALGAVIFLAS  60
   61 GIPRIQQDIL GYIPGLSKYY EKDLPASDNN SIPSFTAWVS FAKLQRFVTC MSTHRCLIPA 120
  121 LWVPDLDDEG ATPMGWLVFS INEGTAYIQL GGMGTPRLAE LWPSLVIKIH FFSINQDKMS 180
  181 TLFVAKRQAA RAASQLRCFS STPSRGAAEV KKLGVLGAGQ MGLGIALVAA RVAQVPVTLV 240
  241 DPSQGALDKG LSLADKLLSK DLQKSRISQE DADATRGRLS PTTSMDSLAD VDFVIEAVPE 300
  301 IPNLKYEIFS KLAQICPKHA ILATNTSSIS ITRIAAATTK DATDLSASSR VVSTHFMNPV 360
  361 PVMKGVEIIS GLQTSQETLD TAVAFCKAMG KVPSTSADSP GFLANRILMP YINEAVICLE 420
  421 TKVGDRDSID TIMKTGTNVP MGPLQLADFI GLDTCLAIMK VLHTETGDSK YRPSVLLQKM 480
  481 VDAGWLGKKS GKGFYDY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle