YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39952135, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKISSIVTLY MATVHALSNK LNRRSVTSME SLIDLSDANS ALDLKQIRFQ LIRLEDSITF  60
   61 HLIERVQFPL NKNIYVSGAV KIPNSTLSFM DWCLWEQERV QSLIRRYESP DEYPFFPEAL 120
  121 QSPILPSLNY PRILNPNDVN VNTKIKEFYT EHFLPAACPK PEHGDRGAGQ ENYGSSATAD 180
  181 IACLQALSRR IHFGKFVAES KFRSEEKKYT EMIKAGDRQG IGKAITNEAV EKQVLDRLRL 240
  241 KVQTYGRDPI TMSEHDIPSK INVEAVVSMY RDYVIPLTKE VEVEYLMQRL QPAA

Type	Start	End	Confidence
Signal Peptide	1	16	0.88
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	294	0.99