YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38110325, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLALRRVAAA APVARQFSAA PRAAATFAFS RYYSSQGERV AKFTGKKDAS GRYPVSLIEG  60
   61 DGIGPEISEA VKQIFEAAKA PVSWEPVDVT PILKDGRTAI PDAAIESIER NKVALKGPLA 120
  121 TPIGKGHVSL NLTLRRTFNL FANLRPCRSV AGFKTPYDNV DTVLIRENTE GEYSGIEHVV 180
  181 VDGVVQSIKL ITREASERVL RFAFQHAQEI GRKKVRVVHK ATIMKMSDGL FLSVGQQVAK 240
  241 DFPGIEFDAE LLDNTCLKMV TDPLPYNDKV LVMPNLYGDI LSDMCAGLIG GLGLTPSGNI 300
  301 GDECSIFEAV HGSAPDIAGK GLANPTALLL SSMMMLRHMG LGEYADRIEK ATFDTLAEGK 360
  361 ALTGDLGGKA KTHEFAGAII SKL

Type	Start	End	Confidence
Signal Peptide	1	24	0.88
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	383	0.99