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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|145019541, gi...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKWRYGVI LDAGSSGTRL HIYRWQDPGK ARKHATKEAL QSLPQLETKD KWTKKTRPGI  60
   61 STFGTSPNDV GPDHLQDLID HALKYVPKKK QQDTPVFLMA TAGMRLLPEM QQKALLKETC 120
  121 TYLRQNTEFA LPDCDLHIQV IPGETEGLYG WVASNYLLGG FDNPQNHHHG KGHHTYGFLD 180
  181 MGGASAQIAF APNSTEAEKH ANDLKRLRLR TLDGQASEFK VFTATWLGFG VNQARQSYVK 240
  241 GLLEGASVDA SEIPDPCMPK GLRTTPTGEV IEDAAGNKNR TLIGTGMFKE CQLKTHPLLG 300
  301 KDAPCNDHPC LLNGQHVPAI DFEVNHFVGV SEYWHTTHGV FGKGDKAYDF ATYQKRVQDY 360
  361 CTQDWDAIES QLEPRKKHSA KNAQEACFKA AWLMNVLHEG IGIPRVGLEH TPKVNVSKGA 420
  421 LENAKDKGFI DPFKAVDEID GVEVSWTLGK MLLYAAGQVP PPEAMQAKAL PVGFGSNVDG 480
  481 VPPDFNFAGS SWSPIQQEDD DHDDDWSDDI VDKVKSSKST SGFLIFVLIL FILGYFLRKR 540
  541 ERRMRLFSKV NSMFRRSRKP GSPRKASRGL AGLRNKLFWR TSSTSYERIL EDGDAEQFAL 600
  601 GDIDSDVSDG SDSSDGGSSS SRRILATGGG RSSGLATPKL NVEMFDDNNR SVSAIDRSGL 660
  661 VVRTESRERL VPNLQMSNAG RRSRAGSPTR MKSPLVSTFQ DD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle