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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38111769, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVRSRKPAT QLDLGVQNQQ SSTHVPSGAR VAAPLPANKT NKDPPPEKAT DVRRRSYVIL  60
   61 SFWALILSVG LPIWWHTTSV YRASLPLDEM MDWADGRACR PTFPLTIAIE KGNMRQDETD 120
  121 VLIQMTQMVL DSLSESTDST DRQLRLTVAD ETSVDDEKIA LTVRLNPGDT TTTALQPEQP 180
  181 ILQVTYAANT LPSPGLASRI ARDVHAVLSE EQAVVSNLVA EASGSTKPSL SGVSPAVAAA 240
  241 VAKRSTRSLK YAPTYHLTFS LFTAGSSPSS WDIDAAVEQY MRPVLDVLSP IHNFTIDTQV 300
  301 QLYAAPGVQS DVLSKDDLSS FINAAEWPLS PSIGGAPTIN FVVFVGNQSI SLPTTEAGSD 360
  361 ATATAQSWLI PQWGTVYLVP QTAENANKVP AQSLRAPMAT FTAHLLSLLG TPETSGSLPL 420
  421 RLAGLRRIRS ADLVLRASSS LGSLARLSRA LPGIAIPRSV ADGVSTTIRH LRQACDALGT 480
  481 SAGLAHARIA QVAADKAFFE KSMVGQLYFP DEHKVAVYLP LLGPVGVPLV MGLLNELKAW 540
  541 RKRRQEKAAA EKTGKKTE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle