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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|31566352
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASGSSGDSGA GLWGGCPPTA ELLRNGGCDW LAGIFRVGER VRYHGRLNLQ GLLLEMLFLA  60
   61 FHAGSWGSWC CCCCVITADR PWDRGRRWQL EMADTPSVYE TRFEAAVKVI QSLPKNGSFQ 120
  121 PTNEMMLKFY SFYKQATEGP CKLSRPGFWD PIGRYKWDAW SSLGDMTKEE AMIAYVEEMK 180
  181 KIIETMPMTE KVEELLHVIG PFYEIVEDKK SSKSSDLTSD LGNVLTSSNA KAVNGKAESS 240
  241 DSGAESEEEE AQEELKGAEQ SGSDDKKTLK KSADKNLEII VTNGYKGSFV QDIQSDIHTD 300
  301 SSRSTRSSED EKPGDESSQQ TGHTIVCAHQ DRNEDPSEDA SGIHHLTSDS DSEVYCDSME 360
  361 QFGQEEYYLG GDPTQHLESS GFCEDAQQSP GNGSIGKMWM VAVKGKGEVK HGGEDGRSSS 420
  421 GAPHRETRGG ESEDFSSVRR GRGNRIPHLS EGPKGRQVGS GGDGERWGSD RGSRGSLNEQ 480
  481 IALVLIRLQE DMQNVLQRLH KLETLTASQA KLSLQTSNQP SSQRPAWWPF EMSPGALAFA 540
  541 IIWPFIAQWL AHLYYQRRRR KLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle