YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VAM7B_DICDI
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIIYSLVAR GSSVLAEFTS TNGNFVTITR RILDLIPPND TKMSYVYEKY IFHYLVSDTL  60
   61 TYLCMADEEF GRRIPFTFLD DVKNRFKSMY GDKGKTAIAY GMNSDFSRTL ENLMDHYSNT 120
  121 TRVDTMSRTM AEIDEVKNIL VSDIAPQLLK RGEKIEMLVE RTDTLNQQSF KFKKQSKQLK 180
  181 CAMWWKNVKL MLVLGAIVLI IIFIIVMSYC DGFRSGSKCR SSPSSNSTPT PTPTETPTPT 240
  241 PTPTSTPTPS QLLETLLNQF

Type	Start	End	Confidence
Cytoplasmic	1	189	0.90
Transmembrane Helix	190	210	0.91
Non-Cytoplasmic	211	260	0.90