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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BLML1_DICDI
Protein type: Transmembrane
Type Confidence: 0.56
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNILSFSFS FSFLYILFLL LFLNNNLLII KSCPTYPNPI KLNQNESLLI EAYNQIDELI  60
   61 QNNMKLNNVT SFIATIVYMD EIVWSKTYGN LNPLDDKSPP LTIDNNIKIA SLTKVFTSLM 120
  121 MYQLRDNGKI LSLDDKISNY FPKFKINDIY KLKSSGSGSK SGKSDIKDNS ITFRQLASHQ 180
  181 SGLPREVPCD SITYGTKNCT ENIIFERLSK QFTLLKQYSE VHYSNLGFAL LGKILGEIIS 240
  241 NSTNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NKIKTNDLIS SNEQFQYENY 300
  301 ILNNILKPLN MMNSTFNYDD IDSNNLALGY TILKNGTFEI VQRQNSGWNS PAGGLYSTAR 360
  361 DISKFMIFWL NNGIISNNNN KNDNNNNNNE NNDNLVKEST INEALLPVSL ISDGLTAYGT 420
  421 PFEMWYDQQN NIWLKSKAGI ANAYRTQMAL IPPLKLGMFF SSQFVFDTPD LFTREVSQIL 480
  481 IPVYEYLLNK KQEEKEEKEE EEENQQDESQ QQQQQQQNNI KLLSNDIFIG NYLNEFGSIF 540
  541 NVFIDDSTGL LYCNFGNDFV YLISDFDDSY NFPHIKRISL LDPKKYICWP IVDGANEELI 600
  601 YFTFNDDDSR NSITCTGVQV LGQFLYKT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle