YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2736083
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIYLDLIWM LNFGLDTILL MLCAAVLKRN YKWWRLLLGG FIGSLIVLLM FTPFSHLMVH  60
   61 PAIKILFSFF MVLMTFGYKR LRFFFENLLT FYFATFVVGG GLMGVHFLFQ DQFLVLNQMV 120
  121 DTKSPQFGDP ISWIFVLIGF PLLSYFSKTR VDDLRIKNIT FDQLVDVEII LNEQTLSMKG 180
  181 LIDSGNQLVD PLTKTPVMIV TADSLKEILP EGLMELSKNV QSFSHSEDID QEWYSKVRFV 240
  241 PYRSVGQANQ LLLALKPDMV RLVHQSNTIE VTKVLVGISH TTLSVEKQYE CIVHPKLIVI 300
  301 GEVSSAS

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.92
Transmembrane Helix	7	27	0.91
Cytoplasmic	28	32	0.92
Transmembrane Helix	33	54	0.89
Non-Cytoplasmic	55	59	0.75
Transmembrane Helix	60	78	0.93
Cytoplasmic	79	87	0.84
Transmembrane Helix	88	109	0.95
Non-Cytoplasmic	110	129	0.91
Transmembrane Helix	130	147	0.92
Cytoplasmic	148	307	0.95