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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|405863, gi|744170
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMANYGFCT IFAATSGNKG RKIHMKWLCS VGIAVSLALQ PALADDLFGN HPLTPEARDA  60
   61 FVTELLKKMT VDEKIGQLRL ISVGPDNPKE AIREMIKDGQ VGAIFNTVTR QDIRAMQDQV 120
  121 MELSRLKIPL FFAYDVLHGQ RTVFPISLGL ASSFNLDAVK TVGRVSAYEA ADDGLNMTWA 180
  181 PMVDVSRDPR WGRASEGFGE DTYLTSTMGK TMVEAMQGKS PADRYSVMTS VKHFAAYGAV 240
  241 EGGKEYNTVD MSPQRLFNDY MPPYKAGLDA GSGAVMVALN SLNGTPATSD SWLLKDVLRD 300
  301 QWGFKGITVS DHGAIKELIK HGTAADPEDA VRVALKSGIN MSMSDEYYSK YLPGLIKSGK 360
  361 VTMAELDDAA RHVLNVKYDM GLFNDPYSHL GPKESDPVDT NAESRLHRKE AREVARESLV 420
  421 LLKNRLETLP LKKSATIAVV GPLADSKRDV MGSWSAAGVA DQSVTVLTGI KNAVGENGKV 480
  481 LYAKGANVTS DKGIIDFLNQ YEEAVKVDPR SPQEMIDEAV QTAKQSDVVV AVVGEAQGMA 540
  541 HEASSRTDIT IPQSQRDLIA ALKATGKPLV LVLMNGRPLA LVKEDQQADA ILETWFAGTE 600
  601 GGNAIADVLF GDYNPSGKLP MSFPRSVGQI PVYYSHLNTG RPYNADKPNK YTSRYFDEAN 660
  661 GALYPFGYGL SYTTFTVSDV KLSAPTMKRD GKVTASVQVT NTGKREGATV VQMYLQDVTA 720
  721 SMSRPVKQLK GFEKITLKPG ETQTVSFPID IEALKFWNQQ MKYDAEPGKF NVFIGTDSAR 780
  781 VKKGEFELL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle