YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47971182
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAESHLNGAY YGPSIPPSSK TYHHHGRGSS CNPCSCLFGC LCNCIFQIFF TILVIIGVAA  60
   61 LVLWLVLRPN KVKFYVTDAT LTQFDLSTTN NTINYDLALN MTIRNPNKRI GIYYDSIEAR 120
  121 AMYQGERFAS QNLEPFYQGH KNTSSLHPVF KGQSLVLLGD REKTNYNNEK NAGVYEMEVK 180
  181 LSMRIRLKFG WIKTRKIKPK IECDFKVPLE SNGRSSSANF EETRCHLDW

Type	Start	End	Confidence
Cytoplasmic	1	43	0.49
Transmembrane Helix	44	67	0.87
Non-Cytoplasmic	68	229	0.53