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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25012477
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRFNRRWSQT CPKCQKYLPR FSENSALWNE IRMDPDNDIY AFYDIRGYKG KCRPGRPNSE  60
   61 RILQPRMSLL GKPLNYNRGT RRDVRYRRLQ SRLYNFLERP RGLHAIFYHV MVFLMVFTCL 120
  121 ALSVFSTIKE YEEDAVYILF RMEILVVIWF TMEFGARLWS SGCRSRYQGC LGRLKFVKRP 180
  181 FCIIDIVTIL ASIVVLGMGT SGQVFATSAL RGLRFFQILR MVRMDRRGGT WKLLGSVVYA 240
  241 HRQELITTMY IGFLGLIFAS FLVYMWEKDV NDKFSNFAQA LWWGVITLCT VGYGDMVPIT 300
  301 WQGKLIASCC ALLGISFFAL PAGILGSGFA LKVQQQQRQK HMIRRRQPAA TLIQAVWRCY 360
  361 AADEHSVSVA TWNIHRVALP SPPASRASSS FKHNTSFVAR LPTIRRHKSQ TIQTPGGGDG 420
  421 GGVSKPPGSS RASTRYTRTI RDINASVENL DEEDEPRCTQ LTNRHKTAIR FIRKLKYFVA 480
  481 RRKFKEALKP YDVKDVMEQY AAGHVDLLGR VKMLHLRLDQ ILGKQGSKAK DVYASKISLA 540
  541 SRVVKVERQV ADIEEKLDIL IKAYMEDRDR FLALPLPAKP KIHSISPSHK PLHHAHNLAM 600
  601 IDVWKRTAAL SVHPEQVTTT PLLNPSAPDS SELRSLTATQ TPTTTTDAIA TQTPMPPHVQ 660
  661 HTATNTKSSV LNSYQLGSEK QQHNDVFMTE LENRTKKRVT LSLHRSTSEP YSKQEQRIII 720
  721 PDEGADSLDS SAKPTPPDSS IILIDEYEDF EEEDLNCEGE MDHFPTWEID SDIGVEVDVD 780
  781 ADADGDCDES TEDTALLQCA TRTAIVITPI SPVSSAHNLQ QLNDQTTTLN KSNLLPPDSG 840
  841 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle