YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25013023
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSQCKMGSNT GAWILLGLLA GIASLSSAAN IQRNEDQTIL QNNGNTFLSN GAGQIIRGPD  60
   61 GKTVLIGSDG RRIITDADSS EEDSSHDYGH GGSYNNVIIN GGSGSSVIHG DGHSFIVGDA 120
  121 SHGSYMNSNG RSIRIINGAI ELNDHGQVYT FRPKAAGINE KETVTINGQP AQVEYSNGDI 180
  181 VIELADHTVI AKIGGRAFLG DRESFDNRDK LEAEAKNYAD RIQQEVHANL QKTMADIQRD 240
  241 LQNSLGNIFY

Type	Start	End	Confidence
Cytoplasmic	1	9	0.85
Transmembrane Helix	10	31	0.85
Non-Cytoplasmic	32	250	0.96