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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187039186, gi...
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLRGIFGGV FFIFLLCSCT ALFVLHSLYF IFRTASQTEK TETKTVHDDQ LFIPALIICN  60
   61 RMPFSQDGLN NVNVNLRQDS ALRYLLEWTN PSLREAADYT PPAADFMNQG QNTVLQYITQ 120
  121 STRNQTIQNM QYQCQSVINS CSYQGIQLSS FDCCRNLLSL IPSVNGLCWV WRDSTMWQNS 180
  181 TGINRQFSIT FQMTRNSWFS TFVPTHPGVD VYLREDGSDV MRMATELENP IRLQDKRGVR 240
  241 LQMRKTKKAD IRRTSCGYAL GDARRSDVHA FKNNHTNYLM CNMMVAMRYC NCHPLMAELL 300
  301 HYDPSSFRDF LLRVSQTNVC SVDAYDNCAR RYIDLTRVEN WDEDIPKDLP GYEDAKRCRN 360
  361 DNQRSCLITS YPGTIEGYDL PEEYRTTQDY VSRLVLEYST MRTTEILVSK DPNIYELLSF 420
  421 IGYNMALWFT VGHILWSMFW YATGLCCPKR TTNRIMPIVS RKRSVSSPEP IIVEHRPSQS 480
  481 EEAGN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle