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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39581643, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGNGENGGK SEEKQKLLVV TDEVVEMNRV SSARFQVSKT NDEENGEEMV RKLKSGSEPP  60
   61 PPVAQEHVTM VTRKMSATGR FMVTSDTNPG QLVAEIANEL DVITPLEAPE RSPASRAKGV 120
  121 HFSVGDKDSG SISDETEDRK KEKDHSHENQ TTFNMKSWRN MRTIEHPPII DFYRNSIDTD 180
  181 AVFNRPSMAQ LIHGKQHNEE DLGFEELNVR VWERSLTEKK LRKIDFLKTR STEKLREKVH 240
  241 FSTFFKFSKC KFALLIMPRR RSHTEVMNEW RDRDLRIVVP SGSDEQSSRA SFHLSIYKNI 300
  301 EKFEKPPFQS ALSPSSDTEL SEIRSSVGMS NLVSEEIAQI DRETSRLMVE EAFHRRTLRK 360
  361 LKRDRNIFVT CVLLMGIVFI GSEFESKMQL GLLVILLGSI ANYIFGSFFT PSELAINRGA 420
  421 TGYSFDTLQS NFLPHFTDNN TFFSVFSVYF PAATGIMAGA NISGDLANPQ RSIPLGTLLA 480
  481 ILVTTIVYLA TVWMTGSTVV AFSNGTEPAL FNNSVFIPPD CAPDCPFGLV SYYQVVEMSS 540
  541 FWGPLITAGI FAATLSSALA SLVSAPKVFQ AVCKDRLFPR IDYFAKTYGK NEEPKRAYVL 600
  601 GFFLALGIVA IGDLNVIAPI ISNFFLGSYA LINYACFDQS FADSPGFRPG FTYYNMWISL 660
  661 IGAILCVFVM FIIDWFSALV TFFCFGAIFM YLLHRKPDVN WGSSTQAHSY KNALSAMIKL 720
  721 STTEEHVKNY RPQVLVLSGN PASRSCLVDF ANNITKGSSL LVCGQVVPYD PSDRVHTVIR 780
  781 KLDDVVSIWM RKRHLKAFYR AVANSSFRKG AQSLIQLTGI AKMKPNIVLV GFKSNWYMGG 840
  841 PTEQNLNEMN EYFGTIQDVF DWNMAVCVLR NGGVGLDFSE AMRNLNLVES SSKINVPNIE 900
  901 NQEKVEKSTN GNLSPETVHL IEKDETARTE KSADDASSRL SYRGSFRSME MFQRINAFYI 960
  961 NGSE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle